---

Lactobacillus crispatus group (Species)

This taxon was found in 1.02% of wild mice ileocecum (with ≥1% threshold).

---

Relative abundance in each sample

Sample accession	Project accession	Sampling location	Genotype	Vendor	Origin	Count	Relative abundance (%)
SRS2290121	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	308	2.94
SRS2290216	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	85	0.59
ERS2716666	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	44	0.43
SRS2290165	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	37	0.39
SRS2290056	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	36	0.38
SRS2290208	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	38	0.34
SRS2290206	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	90	0.30
ERS2716681	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	129	0.24
SRS2290243	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	31	0.09
SRS2290159	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	9	0.08
SRS2290207	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	28	0.07
SRS2063208	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	38	0.07
ERS2716614	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	36	0.06
SRS2290061	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	7	0.06
SRS2290210	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	6	0.05
SRS1872597	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	9	0.05
ERS2716680	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	31	0.05
SRS2290215	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4	0.04
SRS2290240	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	10	0.04
SRS2290217	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4	0.02
SRS2290212	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3	0.02
ERS2716146	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	8	0.02
ERS2716145	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	8	0.02
ERS2716677	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	7	0.02
SRS2290209	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	2	0.02
ERS2716622	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	9	0.01
ERS2716097	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	4	0.01
ERS2716747	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	4	0.01
ERS2716577	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	5	0.01
ERS2716547	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	4	0.01
SRS2290163	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	4	0.01
SRS2290200	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	3	0.01
SRS2290242	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
SRS2063201	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	6	0.01
ERS2716679	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	5	0.01
ERS2716278	ERP110263	Ileum	C57BL/6	Envigo	Laboratory	4	0.01
ERS2716365	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	4	0.01
ERS2716345	ERP110263	Ileum	C57BL/6	Envigo	Laboratory	2	0.01
SRS2290093	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.01
ERS2716108	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	4	0.01
SRS1872566	SRP095440	Feces	C57BL/6	Shanghai Laboratory Animal Center	Laboratory	1	0.01
SRS2290105	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
ERS2716510	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	3	0.00
ERS2716197	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	2	0.00
ERS2716220	ERP110263	Ileum	C57BL/6	Envigo	Laboratory	2	0.00
SRS2290241	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
ERS2716476	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	1	0.00
SRS2529794	SRP145069	Colon	C57BL/6	Janvier Labs	Laboratory	1	0.00
SRS4889769	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
ERS2716644	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	2	0.00
SRS2063205	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	2	0.00
ERS2716499	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	2	0.00
SRS2290073	SRP109346	Ileocecum	Mus musculus domesticus	Wild mouse	Wild	1	0.00
SRS4889871	SRP200540	Feces	C57BL/6	Taconic Biosciences	Laboratory	1	0.00
SRS3667890	SRP157514	Feces	C57BL/6	Charles River Laboratories	Laboratory	1	0.00
ERS2716555	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	1	0.00
ERS2715835	ERP110263	Colon	C57BL/6	Envigo	Laboratory	1	0.00
SRS1945766	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS1945775	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS1945735	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
ERS2716655	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	1	0.00
ERS2715960	ERP110263	Cecum	C57BL/6	Envigo	Laboratory	1	0.00
SRS1945732	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS1945774	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS1945730	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
SRS876872	SRP056326	Feces	A/J	The Jackson Laboratory	Laboratory	1	0.00
SRS1945769	SRP098151	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
ERS2716700	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	1	0.00
ERS2716344	ERP110263	Ileum	C57BL/6	Envigo	Laboratory	1	0.00
ERS2716532	ERP110263	Jejunum	C57BL/6	Envigo	Laboratory	1	0.00
ERS2716633	ERP110263	Stomach	C57BL/6	Envigo	Laboratory	1	0.00
SRS2063199	SRP102269	Feces	C57BL/6	National Laboratory Animal Center	Laboratory	1	0.00
ERS2716119	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	1	0.00
ERS2716843	ERP110263	Feces	C57BL/6	Envigo	Laboratory	1	0.00
ERS2716144	ERP110263	Duodenum	C57BL/6	Envigo	Laboratory	1	0.00
SRS876933	SRP056326	Feces	C57BL/6	The Jackson Laboratory	Laboratory	1	0.00
ERS2716844	ERP110263	Feces	C57BL/6	Envigo	Laboratory	1	0.00
SRS876876	SRP056326	Feces	A/J	The Jackson Laboratory	Laboratory	1	0.00

---